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quantseq 3’ mrna-seq integrated data analysis pipelines  (Bluebee Inc)

 
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    Structured Review

    Bluebee Inc quantseq 3’ mrna-seq integrated data analysis pipelines
    Quantseq 3’ Mrna Seq Integrated Data Analysis Pipelines, supplied by Bluebee Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/quantseq+data+analysis+pipeline/integrated+quantseq+data+analysis+pipeline/pm40543041-466-14-23
    Average 90 stars, based on 1 article reviews
    quantseq 3’ mrna-seq integrated data analysis pipelines - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    Sequencing:

    Article Title: MicroRNA-200c Attenuates the Tumor-Infiltrating Capacity of Macrophages
    Article Snippet: Single end sequencing was performed on the NextSeq2000 platform (Illumina, San Diego, CA, USA) with 100 cycles. .. Sequencing data were analyzed using the Bluebee QuantSeq Data Analysis Pipeline. ..

    Article Title: Inhibition of PCSK9 with evolocumab modulates lipoproteins and monocyte activation in high-risk ASCVD subjects.
    Article Snippet: .. Sequencing analysis and differential expression (DE) of genes were performed using QuantSeq data analysis pipeline (BlueBee Genomics Platform). ..

    RNA sequencing:

    Article Title: The mRNA-binding protein DDX3 mediates TGF-β1 upregulation of translation and promotes pulmonary fibrosis.
    Article Snippet: Libraries were sequenced using an Illumina NextSeq 500 platform (Texas A&M University Institute for Genome Sciences and Society). .. RNA-sequencing data were analyzed using the QuantSeq Data Analysis Pipeline on the BlueBee Genomic Platform (Supplemental Data 2 for total RNA, Supplemental Data 3 for monosome and polysome mRNA). ..

    Article Title: The mRNA-binding protein DDX3 mediates TGF- β 1 upregulation of translation and promotes pulmonary fibrosis
    Article Snippet: Libraries were sequenced using an Illumina NextSeq 500 platform (Texas A&M University Institute for Genome Sciences and Society). .. RNA-sequencing data were analyzed using the QuantSeq Data Analysis Pipeline on the BlueBee Genomic Platform ( for total RNA, for monosome and polysome mRNA). ..

    Quantitative Proteomics:

    Article Title: Neutralizing IL-38 activates γδ T cell-dependent antitumor immunity and sensitizes for chemotherapy.
    Article Snippet: Libraries were sequenced (single- read, 75 cycles) using High Output Kit V.2 (Illumina) on a NextSeq 2000 sequencer (Illumina). .. Differential expression and GSEA analysis RNA sequencing data was analyzed using the QuantSeq data analysis pipeline from BlueBee Genomics. .. Genes significantly regulated in the absence of IL- 38 and on γδ-TCR blockage were analyzed using the Molecular Signatures Database using Gene Set Enrichment Analysis V.4.3.2 provided by the GenePattern Platform.

    Article Title: Inhibition of PCSK9 with evolocumab modulates lipoproteins and monocyte activation in high-risk ASCVD subjects.
    Article Snippet: .. Sequencing analysis and differential expression (DE) of genes were performed using QuantSeq data analysis pipeline (BlueBee Genomics Platform). ..

    Article Title: Lysosome-Dependent LXR and PPARδ Activation Upon Efferocytosis in Human Macrophages
    Article Snippet: .. RNA-seq data processing and differential expression analysis was performed using the QuantSeq data analysis pipeline from Bluebee Genomics analysis platform following manufacturer’s instructions. ..

    RNA Sequencing:

    Article Title: Neutralizing IL-38 activates γδ T cell-dependent antitumor immunity and sensitizes for chemotherapy.
    Article Snippet: Libraries were sequenced (single- read, 75 cycles) using High Output Kit V.2 (Illumina) on a NextSeq 2000 sequencer (Illumina). .. Differential expression and GSEA analysis RNA sequencing data was analyzed using the QuantSeq data analysis pipeline from BlueBee Genomics. .. Genes significantly regulated in the absence of IL- 38 and on γδ-TCR blockage were analyzed using the Molecular Signatures Database using Gene Set Enrichment Analysis V.4.3.2 provided by the GenePattern Platform.

    Article Title: Neutralizing IL-38 activates γδ T cell-dependent antitumor immunity and sensitizes for chemotherapy
    Article Snippet: Libraries were sequenced (single-read, 75 cycles) using High Output Kit V.2 (Illumina) on a NextSeq 2000 sequencer (Illumina). .. RNA sequencing data was analyzed using the QuantSeq data analysis pipeline from BlueBee Genomics. .. Genes significantly regulated in the absence of IL-38 and on γδ-TCR blockage were analyzed using the Molecular Signatures Database using Gene Set Enrichment Analysis V.4.3.2 provided by the GenePattern Platform.

    Article Title: Lysosome-Dependent LXR and PPARδ Activation Upon Efferocytosis in Human Macrophages
    Article Snippet: .. RNA-seq data processing and differential expression analysis was performed using the QuantSeq data analysis pipeline from Bluebee Genomics analysis platform following manufacturer’s instructions. ..



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